Genetic diversity and relationship of Hedychium from Northeast India as dissected using PCA analysis and hierarchical clustering

TitleGenetic diversity and relationship of Hedychium from Northeast India as dissected using PCA analysis and hierarchical clustering
Publication TypeJournal Article
Year of Publication2014
AuthorsBasak S, Ramesh AMoolam, Kesari V, Parida A, Mitra S, Rangan L
JournalMeta Gene
Start Page459
End page468
Date Published05/2014
Keywordseconomically important genus, essential oil extracted from leaves, Meta Gene
Abstract

Molecular genetic fingerprints of eleven Hedychium species from
Northeast India were developed using PCR based markers. Fifteen
inter-simple sequence repeats (ISSRs) and five amplified fragment
length polymorphism (AFLP) primers produced 547 polymorphic
fragments. Positive correlation (r = 0.46) was observed between the
mean genetic similarity and genetic diversity parameters at the
inter-species level. AFLP and ISSR markers were able to group the
species according to its altitude and intensity of flower aroma.
Cophenetic correlation coefficients between the dendrogram and the
original similarity matrix were significant for ISSR (r = 0.89)
compared to AFLP (r = 0.83) markers. This genetic characterization
of Hedychium from Northeast India contributes to the knowledge of
genetic structure of the species and can be used to define strategies
for their conservation and management.
© 2014 The Authors. Published by Elsevier B.V. This is an open access
article under the CC BY-NC-ND license (http://creativecommons.org/
licenses/by-nc-nd/3.0/).

http://www.sciencedirect.com/science/article/pii/S2214540014000334

Publisher Category: 
Department: